Journal ArticleOpen Access
A chromosome-level genome of the spider <i>Trichonephila antipodiana</i> reveals the genetic basis of its polyphagy and evidence of an ancient whole-genome duplication event
Authors
Zheng Fan, Yuan Tao, Piao Liu, Lu-Yu Wang, …
Author Affiliations
Southwest University, Ministry of Education, Nanjing Agricultural University
Published InGigaScience
Year2021
Citations291
Abstract
BACKGROUND: The spider Trichonephila antipodiana (Araneidae), commonly known as the batik golden web spider, preys on arthropods with body sizes ranging from ∼2 mm in length to insects larger than itself (>20‒50 mm), indicating its polyphagy and strong dietary detoxification abilities. Although it has been reported that an ancient whole-genome duplication event occurred in spiders, lack of a high-quality genome has limited characterization of this event. RESULTS: We present a chromosome-level T. antipodiana genome constructed on the basis of PacBio and Hi-C sequencing. The assembled genome is 2.29 Gb in size with a scaffold N50 of 172.89 Mb. Hi-C scaffolding assigned 98.5% of the bases to 13 pseudo-chromosomes, and BUSCO completeness analysis revealed that the assembly included 94.8% of the…
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