OtherOpen Access
Comprehensive Genome Based Analysis of <i>Vibrio parahaemolyticus</i> for Identifying Novel Drug and Vaccine Molecules: Subtractive Proteomics and Vaccinomics Approach
Author Affiliations
Sylhet Agricultural University, Shahjalal University of Science and Technology
Published InbioRxiv (Cold Spring Harbor Laboratory)
Year2020
Citations4
Abstract
Abstract Multidrug-resistant Vibrio parahaemolyticus has become a significant threat to human health as well as aquaculture, prioritizing the development of effective drug and vaccine candidates. Hence, the study was designed to identify novel therapeutics using a comprehensive genome-based analysis of V. parahaemolyticus. From V. parahaemolyticus proteome, a total of 4822 proteins were investigated in order to find out effective drug and vaccine targets. A range of diverse subtractive proteomics approaches – namely, identification of human non-homologous and pathogen-specific essential proteins, druggability and ‘anti-target’ analysis, prediction of subcellular localization, human microbiome non-homology screening, analysis of virulence factors, protein-protein interactions studies. Among 16 novel cytoplasmic proteins, ‘VIBPA Type II secretion system protein L’ and ‘VIBPA Putative fimbrial protein Z’ were allowed to…
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