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Results for “"Kimberly Sturk‐Andreaggi"”

8 results

Developmental validation of a Nextera XT mitogenome Illumina MiSeq sequencing method for high-quality samples

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Michelle A. Peck, Kimberly Sturk‐Andreaggi, Jacqueline Tyler Thomas, Robert S. Oliver et al.

Journal: Forensic Science International GeneticsYear: 2018Citations: 56

Generating mitochondrial genome (mitogenome) data from reference samples in a rapid and efficient manner is critical to harnessing the greater power of discrimination of the entire mitochondrial DNA (mtDNA) marker. The method of long-range target enrichment, Nextera XT library preparation, and Illum...

Life SciencesBiochemistry, Genetics and Molecular BiologyGenetics
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Repair of DNA damage caused by cytosine deamination in mitochondrial DNA of forensic case samples

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Erin M. Gorden, Kimberly Sturk‐Andreaggi, Charla Marshall

Journal: Forensic Science International GeneticsYear: 2018Citations: 48

DNA sequence damage from cytosine deamination is well documented in degraded samples, such as those from ancient and forensic contexts. This study examined the effect of a DNA repair treatment on mitochondrial DNA (mtDNA) from aged and degraded skeletal samples. DNA extracts from 21 non-probative, d...

Life SciencesBiochemistry, Genetics and Molecular BiologyGeneticsOpen Access
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Bioinformatic removal of NUMT‐associated variants in mitotiling next‐generation sequencing data from whole blood samples

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J. Ring, Kimberly Sturk‐Andreaggi, Michelle A. Peck, Charla Marshall

Journal: ElectrophoresisYear: 2018Citations: 36

Nuclear mitochondrial DNA segments (NUMTs) have arisen because of the transposition of segments of the mitochondrial DNA genome (mitogenome) into the nuclear genome. When using a "mitotiling" strategy, NUMTs may be more readily amplified when targeting the entire mitogenome compared to the control r...

Life SciencesBiochemistry, Genetics and Molecular BiologyMolecular Biology
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Next generation sequencing of STR artifacts produced from historical bone samples

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Erin M. Gorden, Kimberly Sturk‐Andreaggi, Julia Warnke-Sommer, Amy Hazelwood et al.

Journal: Forensic Science International GeneticsYear: 2020Citations: 9

STR artifacts are commonly observed in electrophoretic data and can complicate interpretation of the profiles produced. Even when a consensus approach is applied, reproducible artifacts have the potential to convolute the analysis. DNA obtained from historical bone samples is often heavily degraded ...

Life SciencesBiochemistry, Genetics and Molecular BiologyMolecular Biology
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SNP assays for DVI: cost, time, and performance information for decision-makers

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Katherine B. Gettings, Andreas Tillmar, Kimberly Sturk‐Andreaggi, Charla Marshall

Journal: bioRxiv (Cold Spring Harbor Laboratory)Year: 2024Citations: 4

Abstract In mass disaster events, forensic DNA laboratories may be called upon to quickly pivot their operations toward identifying bodies and reuniting remains with family members. Ideally, laboratories have considered this possibility in advance and have a plan in place. Compared with traditional ...

Life SciencesBiochemistry, Genetics and Molecular BiologyGeneticsOpen Access
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Investigating SNP typing using alternative reference materials with the FORCE panel and QIAseq® chemistry

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Lindsay L Kotchey, Sophie Lee, Leah Nangeroni, Jacqueline Tyler Thomas et al.

Journal: Forensic Science International GeneticsYear: 2025Citations: 2

Advancements in forensic science have introduced single nucleotide polymorphism (SNP) markers as crucial tools in kinship, ancestry, and identity testing, and in predicting phenotypic traits. The emergence of Forensic Genetic Genealogy (FGG) and massively parallel sequencing (MPS) technologies have ...

Life SciencesBiochemistry, Genetics and Molecular BiologyMolecular Biology
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Advancing forensic SNP typing: Insights from an interlaboratory study of the FORCE panel

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Andreas Tillmar, Kimberly Sturk‐Andreaggi, Adam Staadig, Christina Amory et al.

Journal: Forensic Science International GeneticsYear: 2026

This study evaluated the ability to produce FORensic Capture Enrichment (FORCE) genotypes using amplicon-based and capture-based enrichment assays. The FORCE panel is a standardized set of single nucleotide polymorphism (SNP) markers developed for forensic applications. Twelve DNA samples were prepa...

Life SciencesBiochemistry, Genetics and Molecular BiologyGeneticsOpen Access
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Evaluation of bone preparation approaches using length‐based analysis and targeted sequencing for forensic human identification of historic skeletal remains

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Ciara N. Rhodes, Jacqueline Tyler Thomas, Kimberly Sturk‐Andreaggi, Tal Simmons et al.

Journal: Journal of Forensic SciencesYear: 2026

Advances in DNA technology have significantly enhanced the forensic community's ability to develop genetic profiles from unidentified human skeletal remains. However, sampling requires mechanical grinding of hard tissues before DNA isolation. This processing can compromise genetic profiles, particul...

STR analysisDemineralizationDNAOpen Access
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