Zamila Bueaza Bupasha, Ruhena Begum, Sharna Karmakar, Rahima Akter et al.
Multidrug-resistant Salmonella could pose a severe public health threat. The current study aimed to investigate the prevalence of antibiotic resistance and some antibiotic-resistant genes in Salmonella spp. isolated from pigeons in a live bird market, Chattogram, Bangladesh. A total of 100 cloacal s...
Nafis Irtiza Tripto, Mohimenul Kabir, Md. Shamsuzzoha Bayzid, Atif Rahman
Time series gene expression data is widely used to study different dynamic biological processes. Although gene expression datasets share many of the characteristics of time series data from other domains, most of the analyses in this field do not fully leverage the time-ordered nature of the data an...
A.K.M. Kazi Aurnob, Assame Arnob, Kazi Bayzid Kabir, Md. Saiful Islam et al.
M Mahbub Hasan, Mohammad Jalal, M. Bayzid, M. A. M. Sharif et al.
A comparative study on Canine Parvovirus (CPV) infection among the hospitalized dogs at Central Veterinary Hospital (CVH) in Bangladesh and Veterinary College and Research Institute-Madras Veterinary College (VCRI-MVC) in India was conducted during a period of January and July 2015. A total of 270 (...
Kaniz Fatema Rahman, Md Farhatul Abrar, Sanjida Safa Tithi, Kazi Bayzid Kabir et al.
Municipal solid waste (MSW) management is a major concern for Bangladesh, given its high population density and increasing waste production rate. Conventional waste management methods, such as landfilling, result in high carbon emissions for the environment. With over 70% of MSW being organic, hydro...
Baizid Khoorshid Riaz, Md. Abdul Alim, ANM Shamsul Islam, Km Bayzid Amin et al.
Unsafe food is linked to the deaths of an estimated two million people annually. Food containing harmful agents is responsible for more than 200 diseases ranging from diarrhoea to cancers. A one-sample pilot intervention study was conducted to evaluate the role of courtyard counselling meetings as t...
Md. Mominur Rahman, Kazi Bayzid Kabir
Paper sector in Bangladesh is currently expanding day-by-day to meet the increasing demand of industrial, writing/printing and specialty papers. Paper mills have adverse e ects on the environment by producing huge quantity of wastewater. Yearly, approximately 14 million m3 wastewater is being discha...
Sazan Mahbub, Shashata Sawmya, Arpita Saha, Rezwana Reaz et al.
Species tree estimation is frequently based on phylogenomic approaches that use multiple genes from throughout the genome. However, for a combination of reasons (ranging from sampling biases to more biological causes, as in gene birth and loss), gene trees are often incomplete, meaning that not all ...
Nabil Ibtehaz, Ishtiaque Ahmed, Md. Sabbir Ahmed, M. Sohel Rahman et al.
BACKGROUND: Genomic Islands (GIs) are clusters of genes that are mobilized through horizontal gene transfer. GIs play a pivotal role in bacterial evolution as a mechanism of diversification and adaptation to different niches. Therefore, identification and characterization of GIs in bacterial genomes...
Md Masud‐Ul‐Alam, Md. Ashif Imam Khan, Saif Khan Sunny, Atiqur Rahman et al.
In-situ measurement of physical characteristics of seawater (temperature, salinity, and density) collected with a single fire module CTD (Conductivity, Temperature, Depth) in the northern Bay of Bengal (NBoB), as a part of the Indian Ocean, are given in this article. Due to the scanty of data in the...
Md Toki Tahmid, Haz Sameen Shahgir, Sazan Mahbub, Yue Dong et al.
Abstract Recent advancements in Transformer-based models have spurred interest in their use for biological sequence analysis. However, adapting models like BERT is challenging due to sequence length, often requiring truncation for proteomics and genomics tasks. Additionally, advanced tokenization an...
Bayzid Ashik Hossain, Md. Saddam Hossain Mukta, Md. Adnanul Islam, Akib Zaman et al.
Identifying requirements for an information system is an important task and conceptual modelling is the first step in this process. Conceptual modelling plays a critical role in the information system design process and usually involves domain experts and knowledge engineers who brainstorm together ...
Baizid Khoorshid Riaz, Md Ziaul Islam, Helal Uddin Ahmed, Khursheda Akhtar et al.
Background: COVID-19 pandemic imposed a devastating effect on the psychological health of health professionals as they worked nonstop to withstand the hardship of the pandemic. The present study intended to determine the post-traumatic stress disorders (PTSD) and coping strategies among health profe...
Md. Tarikul Islam, Sahil Aman, Taiful Bayzid, Md. Ashikur Rahaman et al.
Novel crystallographic investigation of sol-gel-derived anatase TiO 2 nanocrystals synthesized using tetra isopropyl orthotitanate (TIOT) as a precursor at pH 9.0 for hydrolysis promoter. Unlike conventional methods integrated whole powder pattern fitting (WPPF) based Rietveld refinement to quantita...
Md Ashiqur Rahman, Abdullah Aman Tutul, Mahfuza Sharmin, Md. Shamsuzzoha Bayzid
MOTIVATION: Analyzing large-scale single-cell transcriptomic datasets generated using different technologies is challenging due to the presence of batch-specific systematic variations known as batch effects. Since biological and technological differences are often interspersed, detecting and account...
Naser A. Anjum, Raian Latif Nabil, Rakibul Islam Rafi, Md. Shamsuzzoha Bayzid et al.
Multiple sequence alignment has been the traditional and well established approach of sequence analysis and comparison, though it is time and memory consuming. As the scale of sequencing data is increasing day by day, the importance of faster yet accurate alignment-free methods is on the rise. Sever...
Ishrat Tanzila Farah, Muktadirul Islam, Kazi Tasnim Zinat, Atif Rahman et al.
Species tree estimation from multilocus data sets is extremely challenging, especially in the presence of gene tree heterogeneity across the genome due to incomplete lineage sorting (ILS). Summary methods have been developed which estimate gene trees and then combine the gene trees to estimate a spe...
Muhammad Ali Nayeem, Md. Shamsuzzoha Bayzid, Atif Rahman, Rifat Shahriyar et al.
Multiple sequence alignment (MSA) is a preliminary task for estimating phylogenies. It is used for homology inference among the sequences of a set of species. Generally, the MSA task is handled as a single-objective optimization process. The alignments computed under one criterion may be different f...
Md. Shamsuzzoha Bayzid, Mohiuddin Shoikot, Jafrul Hossain, Anisur Rahman
Human society is moving towards a life that is fully govern by automated system where every important event of our life is locked and protected by a 'String', known as password. Password protection is in high demand and researchers shown fervent interest to accomplish the same. Besides, the process ...
Nilanjan Roy, Acramul Haque Kabir, Nourin Zahan, Shahba Tasmiya Mouna et al.
Abstract Rice genetic diversity is regulated by multiple genes and is largely dependent on various environmental factors. Uncovering the genetic variations associated with the diversity in rice populations is the key to breed stable and high yielding rice varieties. We performed genome wide associat...