Md Firoz Ahmed, Md. Murshed Hasan Sarkar, Kaniz Mehzabin, I. Hossain et al.
K. pneumoniae strains that combine multidrug resistance, hypervirulence and persistence are spreading worldwide, causing a severe threat to public health. Unraveling the genetics that underlies these high-risk clones is critical for the development of countermeasures. We isolated K. pneumoniae JU-BA...
Magaña, Paulyna, Gopalasingam, Piraveen, Fleming, Jennifer, Kovalevskiy, Oleg et al.
AlphaFold is a state-of-the-art protein structure prediction resource that offers immense potential for accelerating scientific discovery. Realising this potential, however, requires equitable access to technology, resources and expertise. To address this need, the AlphaFold Education Summit, held a...
Magaña, Paulyna, Gopalasingam, Piraveen, Fleming, Jennifer, Kovalevskiy, Oleg et al.
AlphaFold is a state-of-the-art protein structure prediction resource that offers immense potential for accelerating scientific discovery. Realising this potential, however, requires equitable access to technology, resources and expertise. To address this need, the AlphaFold Education Summit, held a...
Paulyna Magaña, Piraveen Gopalasingam, Jennifer Fleming, Oleg Kovalevskiy et al.
AlphaFold is a state-of-the-art protein structure prediction resource that offers immense potential for accelerating scientific discovery. Realising this potential, however, requires equitable access to technology, resources and expertise. To address this need, the AlphaFold Education Summit, held a...
Joshi, Jatin, Kakon, Souman Dey, Washington, Ashitha, Singh, Rashi et al.
The ISCB Student Council and its Regional Student Groups organized the 4th Asian Student Council Symposium (#ASCS2025), a forum for students and young researchers in Computational Biology and Bioinformatics. Participants had the opportunity to present their work to an international audience, build a...
Joshi, Jatin, Kakon, Souman Dey, Washington, Ashitha, Singh, Rashi et al.
The ISCB Student Council and its Regional Student Groups organized the 4th Asian Student Council Symposium (#ASCS2025), a forum for students and young researchers in Computational Biology and Bioinformatics. Participants had the opportunity to present their work to an international audience, build a...
Syed Muktadir Al Sium, Mahafujul Islam Quadery Tonmoy, Sanjana Fatema Chowdhury, Fatema Tuz Zohra et al.
Abstract Background Long non-coding RNAs (lncRNAs) are crucial regulators in cancer, yet their epigenetic control in Lung Adenocarcinoma (LUAD) remains underexplored. Aim This study aimed to integrate multi-omics data to identify novel prognostic biomarkers and elucidate their potential mechanism. M...
Syed Muktadir Al Sium, Mahafujul Islam Quadery Tonmoy, Sanjana Fatema Chowdhury, Fatema Tuz Zohra et al.
Abstract Background Long non-coding RNAs (lncRNAs) are crucial regulators in cancer, yet their epigenetic control in Lung Adenocarcinoma (LUAD) remains underexplored. Aim This study aimed to integrate multi-omics data to identify novel prognostic biomarkers and elucidate their potential mechanism. M...
Sanjana Fatema Chowdhury, Md Murshed Hasan Sarkar, Syed Muktadir Al Sium, Md Salim Khan
Abstract Background Beyond viral infection alone, emerging evidence suggests that the respiratory microbiome plays a key role in influencing any disease severity and immune modulation (1,2). While genomic studies of SARS-CoV-2 are abundant, host-microbiome interactions at the transcriptomic level re...
Robel H. Patwary, Md. Zamilur Rahman, Nahid Sultana, Natasha Nafisa Haque et al.
ABSTRACT Microbial inoculants that integrate plant growth promotion, pathogen suppression, and pollutant degradation are central to sustainable agriculture. Here, we report the genomic and phenotypic characterization of Lysinibacillus capsici BCSIR-Raj-01, an endophyte isolated from citrus leaves in...
Sanjana Fatema Chowdhury, Md. Murshed Hasan Sarkar, Syed Muktadir Al Sium, Showti Raheel Naser et al.
Abstract In recent years, the research on Coronavirus disease 2019 (COVID-19) has surged rapidly due to its infectious nature and epidemiological importance as a pandemic. Association of other pathogenic microbes or different human microbiomes with COVID-19 severity is well established. While much i...
Md. Murshed Hasan Sarkar, G. M. M. Anwarul Hasan, Anuj Kumer Das, Sanjana Fatema Chowdhury et al.
An Enterobacter kobei strain, named as BCSIR-MEcoli, isolated from a milk sample, was subjected to comprehensive genomic analysis to elucidate its antibiotic resistance profile, mobile genetic elements (MGEs), and prophage content. Average Nucleotide Identity (ANI) analysis using FastANI 1.3.3 demon...
Shahina Akter, Zebunnesa Zeba, Md. Anwar Hossain, Michael Arthur Ofori et al.
Abstract SARS-CoV-2 is the virus responsible for the COVID-19 pandemic, which has spread rapidly around the world and had a significant impact on public health and the economy worldwide. This study investigated the correlation between SARS-CoV-2 spike protein mutations, clinical outcomes and patient...
Sanjana Fatema Chowdhury, Arsalan Riaz, Rubaiat Ahmed, Gökçe Senger et al.
The ISCB Student Council and its Regional Student Groups organized the <strong>19th Asian Student Council Symposium</strong> (#SCS2023), directly preceding the 31st Annual Intelligent Systems For Molecular Biology and the 22nd Annual European Conference on Computational Biology (#ISMBECCB2023). The ...
Sanjana Fatema Chowdhury, Arsalan Riaz, Rubaiat Ahmed, Gökçe Senger et al.
The ISCB Student Council and its Regional Student Groups organized the <strong>19th Student Council Symposium</strong> (#SCS2023), directly preceding the 31st Annual Intelligent Systems For Molecular Biology and the 22nd Annual European Conference on Computational Biology (#ISMBECCB2023). The Studen...
Md. Murshed Hasan Sarkar, Showti Raheel Naser, Sanjana Fatema Chowdhury, Md. Salim Khan et al.
Abstract Quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) is the gold standard method for SARS-CoV-2 detection, and several qRT-PCR kits have been established targeting different genes of the virus. Due to the high mutation rate of these genes, false negative results arise thus...
Alastair M. Kilpatrick, Farzana Rahman, Audra Anjum, Sayane Shome et al.
Wikipedia is regarded as one of the most important channels for the public communication of science; English Wikipedia has around 1,500 articles relating to computational biology, which are frequently accessed as an educational resource. Joint efforts between the International Society for Computatio...
Alastair M. Kilpatrick, Farzana Rahman, Audra Anjum, Sayane Shome et al.
Wikipedia is regarded as one of the most important channels for the public communication of science; English Wikipedia has around 1,500 articles relating to computational biology, which are frequently accessed as an educational resource. Joint efforts between the International Society for Computatio...
Md. Faruque Miah, M. S. Rahaman, Sanjana Fatema Chowdhury, Mohammad Golam Rob Mahmud
Background: The genetic variability of Umbilical Cord Blood (UCB) is most important for newborn screening, therapeutic possibility of haematological disorders as well as for the establishment of cord blood banking and stem cell research.
 Method: Genetic variability of umbilical cord blood (UCB...