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Results for “"Karim Gharbi"”

11 results

Mapping and Validation of the Major Sex-Determining Region in Nile Tilapia (Oreochromis niloticus L.) Using RAD Sequencing

Verified

Christos Palaiokostas, Michaël Bekaert, Mohd Golam Quader Khan, John B. Taggart et al.

Journal: PLoS ONEYear: 2013Citations: 183

Sex in Oreochromis niloticus (Nile tilapia) is principally determined by an XX/XY locus but other genetic and environmental factors also influence sex ratio. Restriction Associated DNA (RAD) sequencing was used in two families derived from crossing XY males with females from an isogenic clonal line,...

Life SciencesBiochemistry, Genetics and Molecular BiologyGeneticsOpen Access
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A novel sex-determining QTL in Nile tilapia (Oreochromis niloticus)

Verified

Christos Palaiokostas, Michaël Bekaert, Mohd Golam Quader Khan, John B. Taggart et al.

Journal: BMC GenomicsYear: 2015Citations: 122

BACKGROUND: Fish species often exhibit significant sexual dimorphism for commercially important traits. Accordingly, the control of phenotypic sex, and in particular the production of monosex cultures, is of particular interest to the aquaculture industry. Sex determination in the widely farmed Nile...

Life SciencesBiochemistry, Genetics and Molecular BiologyGeneticsOpen Access
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The Laboratory Domestication of Zebrafish: From Diverse Populations to Inbred Substrains

Verified

Jaanus Suurväli, Andrew R. Whiteley, Yichen Zheng, Karim Gharbi et al.

Journal: Molecular Biology and EvolutionYear: 2019Citations: 53

We know from human genetic studies that practically all aspects of biology are strongly influenced by the genetic background, as reflected in the advent of "personalized medicine." Yet, with few exceptions, this is not taken into account when using laboratory populations as animal model systems for ...

Life SciencesBiochemistry, Genetics and Molecular BiologyCell BiologyOpen Access
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Correction: Mapping and Validation of the Major Sex-Determining Region in Nile Tilapia (Oreochromis niloticus L.) Using RAD Sequencing

Verified

Christos Palaiokostas, Michaà l Bekaert, Mohd Golam Quader Khan, John B. Taggart et al.

Journal: PLoS ONEYear: 2013Citations: 37

Sex in Oreochromis niloticus (Nile tilapia) is principally determined by an XX/XY locus but other genetic and environmental factors also influence sex ratio. Restriction Associated DNA (RAD) sequencing was used in two families derived from crossing XY males with females from an isogenic clonal line,...

Life SciencesAgricultural and Biological SciencesAquatic ScienceOpen Access
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Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, Oreochromis niloticus) highlights regions of introgression with O. mossambicus

Verified

Graham Etherington, Will Nash, Adam Ciezarek, T. K. Mehta et al.

Journal: BMC GenomicsYear: 2022Citations: 13

BACKGROUND: The Nile tilapia (Oreochromis niloticus) is the third most important freshwater fish for aquaculture. Its success is directly linked to continuous breeding efforts focusing on production traits such as growth rate and weight. Among those elite strains, the Genetically Improved Farmed Til...

Life SciencesBiochemistry, Genetics and Molecular BiologyGeneticsOpen Access
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The laboratory domestication of zebrafish: from diverse populations to inbred substrains

Verified

Jaanus Suurväli, Andrew R. Whiteley, Yichen Zheng, Karim Gharbi et al.

Journal: bioRxiv (Cold Spring Harbor Laboratory)Year: 2019Citations: 5

Abstract The zebrafish ( Danio rerio ) is a model vertebrate widely used to study disease, development and other aspects of vertebrate biology. Most of the research is performed on laboratory strains, one of which has been fully sequenced in order to derive a reference genome. It is known that the l...

Life SciencesBiochemistry, Genetics and Molecular BiologyGeneticsOpen Access
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Additional file 6 of Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, Oreochromis niloticus) highlights regions of introgression with O. mossambicus

Verified

Graham Etherington, Will Nash, Adam Ciezarek, T. K. Mehta et al.

Journal: FigshareYear: 2023

Additional file 6: Supplementary Table 3. Genes identified within O. mossambicus introgressed regions including corresponding orthologs in medaka.

Life SciencesAgricultural and Biological SciencesEcology, Evolution, Behavior and SystematicsOpen Access
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Additional file 8 of Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, Oreochromis niloticus) highlights regions of introgression with O. mossambicus

Verified

Graham Etherington, Will Nash, Adam Ciezarek, T. K. Mehta et al.

Journal: FigshareYear: 2023

Additional file 8: Supplementary Table 4. Ontology terms significantly enriched among genes identified within O. mossambicus introgressed regions.

Life SciencesAgricultural and Biological SciencesEcology, Evolution, Behavior and SystematicsOpen Access
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Additional file 1 of Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, Oreochromis niloticus) highlights regions of introgression with O. mossambicus

Verified

Graham Etherington, Will Nash, Adam Ciezarek, T. K. Mehta et al.

Journal: FigshareYear: 2023

Additional file 1: Supplementary Table 1. Assembly statistics.

Life SciencesAgricultural and Biological SciencesEcology, Evolution, Behavior and SystematicsOpen Access
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Additional file 3 of Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, Oreochromis niloticus) highlights regions of introgression with O. mossambicus

Verified

Graham Etherington, Will Nash, Adam Ciezarek, T. K. Mehta et al.

Journal: FigshareYear: 2023

Additional file 3: Supplementary Table 2. Genomics regions in GIFT with evidence of O. mossambicus introgression.

Life SciencesAgricultural and Biological SciencesEcology, Evolution, Behavior and SystematicsOpen Access
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Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, <i>Oreochromis niloticus</i> ) highlights regions of introgression with <i>O. mossambicus</i>

Verified

Graham Etherington, Will Nash, Adam Ciezarek, T. K. Mehta et al.

Journal: bioRxiv (Cold Spring Harbor Laboratory)Year: 2022

Background The Nile tilapia ( Oreochromis niloticus ) is the third most important freshwater fish for aquaculture. Its success is directly linked to continuous breeding efforts focusing on production traits such as growth rate and weight. Among those elite strains, the Genetically Improved Farmed Ti...

Life SciencesImmunology and MicrobiologyImmunologyOpen Access
Read Source
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