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Results for “"Mahafujul Islam Quadery Tonmoy"”

19 results

AD-CovNet: An exploratory analysis using a hybrid deep learning model to handle data imbalance, predict fatality, and risk factors in Alzheimer's patients with COVID-19

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Shamima Akter, Depro Das, Rakib Ul Haque, Mahafujul Islam Quadery Tonmoy et al.

Journal: Computers in Biology and MedicineYear: 2022Citations: 28

Alzheimer's disease (AD) is the leading cause of dementia globally, with a growing morbidity burden that may exceed diagnosis and management capabilities. The situation worsens when AD patient fatalities are exposed to COVID-19. Because of differences in clinical features and patient condition, a pa...

Health SciencesMedicineRadiology, Nuclear Medicine and ImagingOpen Access
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Cell cycle associated miRNAs as target and therapeutics in lung cancer treatment

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Atqiya Fariha, Ithmam Hami, Mahafujul Islam Quadery Tonmoy, Shahana Akter et al.

Journal: HeliyonYear: 2022Citations: 25

Lung cancer is the primary cause of cancer related deaths worldwide. Limited therapeutic options and resistance to existing drugs are the major hindrances to the clinical success of this cancer. In the past decade, several studies showed the role of microRNA (miRNA) driven cell cycle regulation in l...

Life SciencesBiochemistry, Genetics and Molecular BiologyCancer ResearchOpen Access
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Deleterious single nucleotide polymorphisms (SNPs) of human IFNAR2 gene facilitate COVID-19 severity in patients: a comprehensive<i>in silico</i>approach

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Shamima Akter, Arpita Singha Roy, Mahafujul Islam Quadery Tonmoy, Md. Sajedul Islam

Journal: Journal of Biomolecular Structure and DynamicsYear: 2021Citations: 17

gene can help to recognize severe illness due to COVID 19 and consequently assist to develop an effective drug against the infection.Communicated by Ramaswamy H. Sarma.

Life SciencesImmunology and MicrobiologyImmunology
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Genome-wide identification and prediction of SARS-CoV-2 mutations show an abundance of variants: Integrated study of bioinformatics and deep neural learning

Verified

Md. Shahadat Hossain, A. Q. M. Sala Uddin Pathan, Md Nur Islam, Mahafujul Islam Quadery Tonmoy et al.

Journal: Informatics in Medicine UnlockedYear: 2021Citations: 16

Genomic data analysis is a fundamental system for monitoring pathogen evolution and the outbreak of infectious diseases. Based on bioinformatics and deep learning, this study was designed to identify the genomic variability of SARS-CoV-2 worldwide and predict the impending mutation rate. Analysis of...

Health SciencesMedicineInfectious DiseasesOpen Access
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Prediction of the Effects of Variants and Differential Expression of Key Host Genes <i>ACE2</i> , <i>TMPRSS2</i> , and <i>FURIN</i> in SARS-CoV-2 Pathogenesis: An <i>In Silico</i> Approach

Verified

Md. Shahadat Hossain, Mahafujul Islam Quadery Tonmoy, Atqiya Fariha, Md. Sajedul Islam et al.

Journal: Bioinformatics and Biology InsightsYear: 2021Citations: 16

A new strain of the beta coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is solely responsible for the ongoing coronavirus disease 2019 (COVID-19) pandemic. Although several studies suggest that the spike protein of this virus interacts with the cell surface receptor, angi...

Health SciencesMedicineInfectious DiseasesOpen Access
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Meta-analysis investigating the impact of the LEPR rs1137101 (A&gt;G) polymorphism on obesity risk in Asian and Caucasian ethnicities

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Dilara Akhter Supti, Farzana Akter, Md. Imranur Rahman, Md. Adnan Munim et al.

Journal: HeliyonYear: 2024Citations: 14

Obesity is a chronic condition which is identified by the buildup of excess body fat caused by a combination of various factors, including genetic predisposition and lifestyle choices. rs1137101 (A > G) polymorphism in the CHR1 domain of LEPR protein linked to different diseases including obesity. N...

Life SciencesNeuroscienceEndocrine and Autonomic SystemsOpen Access
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Association of an intronic SNP rs9939609 in FTO gene with type 2 diabetes mellitus among Bangladeshi population: A case–control study combined with updated meta-analysis

Verified

Kumkum Kar, Md. Adnan Munim, Atqiya Fariha, Arpita Singha Roy et al.

Journal: Human GeneYear: 2022Citations: 12
Life SciencesBiochemistry, Genetics and Molecular BiologyGenetics
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Identification of novel inhibitors of high affinity iron permease (FTR1) through implementing pharmacokinetics index to fight against black fungus: An in silico approach

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Mahafujul Islam Quadery Tonmoy, Sk. Faisal Ahmed, Ithmam Hami, Shahriar Kabir Shakil et al.

Journal: Infection Genetics and EvolutionYear: 2022Citations: 11

Mucormycosis is a life-threatening fungal infection, particularly in immunocompromised patients. Mucormycosis has been reported to show resistance to available antifungal drugs and was recently found in COVID-19 as a co-morbidity that demands new classes of drugs. In an attempt to find novel inhibit...

Life SciencesAgricultural and Biological SciencesPlant ScienceOpen Access
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Computational epigenetic landscape analysis reveals association of CACNA1G-AS1, F11-AS1, NNT-AS1, and MSC-AS1 lncRNAs in prostate cancer progression through aberrant methylation

Verified

Mahafujul Islam Quadery Tonmoy, Atqiya Fariha, Ithmam Hami, Kumkum Kar et al.

Journal: Scientific ReportsYear: 2022Citations: 8

Aberrant expression of long non-coding RNAs (lncRNAs), caused by alterations in DNA methylation, is a driving factor in several cancers. Interplay between lncRNAs' aberrant methylation and expression in prostate cancer (PC) progression still remains largely elusive. Therefore, this study characteriz...

Life SciencesBiochemistry, Genetics and Molecular BiologyCancer ResearchOpen Access
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MicroRNAs expression analysis shows key affirmation of Synaptopodin-2 as a novel prognostic and therapeutic biomarker for colorectal and cervical cancers

Verified

Md. Shahadat Hossain, Mahafujul Islam Quadery Tonmoy, Md. Nur Islam, Md. Sajedul Islam et al.

Journal: HeliyonYear: 2021Citations: 7

in CRC and CC. Retinoic acid and Estradiol were identified as putative therapeutic drugs for CRC and CC patients. This study will thus help in understanding the underlying molecular events in CRC and CC that may improve the detection of malignant lesions in primary screening and will broaden the cli...

Life SciencesBiochemistry, Genetics and Molecular BiologyCancer ResearchOpen Access
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Prediction of novel miRNA biomarker candidates for diagnostic and prognostic analysis of STAD and LIHC: An integrated in silico approach

Verified

Kumkum Kar, Atqiya Fariha, Md. Shahadat Hossain, Mahafujul Islam Quadery Tonmoy et al.

Journal: Informatics in Medicine UnlockedYear: 2021Citations: 5

miRNAs are endogenous, non-coding and evolutionarily conserved RNA molecules. They have been found to be involved in the progression and proliferation of various cancers due to their contribution in post-transcriptional regulation. Stomach Adenocarcinoma (STAD) and Liver Hepatocellular Carcinoma (LI...

Health SciencesMedicineSurgeryOpen Access
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Computer-Aided Drug Design Identifies Amentoflavone as Novel RAB10 Inhibitor: Unlocking New Horizons in Hepatocellular Carcinoma Therapy

Verified

Md. Anayet Ullah, Priyanka Paul, Sadia Afrin Runa, Fatema Tuz Johura et al.

Journal: MedinformaticsYear: 2025Citations: 3

Hepatocellular carcinoma (HCC) is the most common type of primary liver cancer and is often associated with a poor prognosis, contributing significantly to cancer-related mortalities. It has been established that RAB10, a member of the RAS family, is overexpressed in HCC and plays an oncogenic role ...

Life SciencesBiochemistry, Genetics and Molecular BiologyMolecular BiologyOpen Access
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Genome-wide identification and prediction of SARS-CoV-2 mutations show an abundance of variants: Integrated study of bioinformatics and deep neural learning

Verified

Md. Shahadat Hossain, A. Q. M. Sala Uddin Pathan, Md. Nur Islam, Mahafujul Islam Quadery Tonmoy et al.

Journal: bioRxiv (Cold Spring Harbor Laboratory)Year: 2021Citations: 3

Abstract Genomic data analysis is a fundamental system for monitoring pathogen evolution and the outbreak of infectious diseases. Based on bioinformatics and deep learning, this study was designed to identify the genomic variability of SARS-CoV-2 worldwide and predict the impending mutation rate. An...

Health SciencesMedicineInfectious DiseasesOpen Access
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Multi-epitope Based Peptide Vaccine Design Using Three Structural Proteins (S, E, and M) of SARS-CoV-2: An <i>In Silico</i> Approach

Verified

Arpita Singha Roy, Mahafujul Islam Quadery Tonmoy, Atqiya Fariha, Ithmam Hami et al.

Journal: bioRxiv (Cold Spring Harbor Laboratory)Year: 2020Citations: 3

Abstract Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2) is the novel coronavirus responsible for the ongoing pandemic of coronavirus disease (COVID-19). No sustainable treatment option is available so far to tackle such a public health threat. Therefore, designing a suitable vaccine to...

Life SciencesBiochemistry, Genetics and Molecular BiologyMolecular BiologyOpen Access
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Multi-epitope based peptide vaccine design using three structural proteins (S, e, and m) of sars-cov-2: An in silico approach

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Arpita Singha Roy, Mahafujul Islam Quadery Tonmoy, Atqiya Fariha, Ithmam Hami et al.

Journal: Journal of Applied Biotechnology ReportsYear: 2021Citations: 2

Introduction: The ongoing global pandemic of coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has jeopardized our health system and leaving everyone in disarray. Despite the diligent cumulative effort of academia, there is hardly any light in...

Life SciencesBiochemistry, Genetics and Molecular BiologyMolecular BiologyOpen Access
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Investigating the Impact of ENPP1 Gene's K121Q (RS1044498) Polymorphism in Type 2 Diabetes via an Updated Meta-Analysis

Verified

Farzana Akter, I. K. M. Reaz Rahman, Dilara Akhter Supti, Md Abdul Kader et al.

Journal: American Journal of Pure and Applied BiosciencesYear: 2024Citations: 1

Type 2 Diabetes Mellitus (T2DM) occurs due to a complex relationship of genetic, environmental, and physiological factors, encompassing insufficient pancreatic insulin synthesis, peripheral insulin resistance, and diverse molecular pathways. The transmembrane glycoprotein ectonucleotide pyrophosphat...

Health SciencesMedicineEndocrinology, Diabetes and MetabolismOpen Access
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Unraveling epigenetically deregulated lncRNAs FAM83A-AS2 and AC012213.1 as high-risk prognostic markers in lung adenocarcinoma

Verified

Syed Muktadir Al Sium, Mahafujul Islam Quadery Tonmoy, Sanjana Fatema Chowdhury, Fatema Tuz Zohra et al.

Journal: Briefings in BioinformaticsYear: 2025

Abstract Background Long non-coding RNAs (lncRNAs) are crucial regulators in cancer, yet their epigenetic control in Lung Adenocarcinoma (LUAD) remains underexplored. Aim This study aimed to integrate multi-omics data to identify novel prognostic biomarkers and elucidate their potential mechanism. M...

Life SciencesBiochemistry, Genetics and Molecular BiologyCancer ResearchOpen Access
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Unraveling epigenetically deregulated lncRNAs FAM83A-AS2 and AC012213.1 as high-risk prognostic markers in lung adenocarcinoma

Verified

Syed Muktadir Al Sium, Mahafujul Islam Quadery Tonmoy, Sanjana Fatema Chowdhury, Fatema Tuz Zohra et al.

Journal: Briefings in BioinformaticsYear: 2025

Abstract Background Long non-coding RNAs (lncRNAs) are crucial regulators in cancer, yet their epigenetic control in Lung Adenocarcinoma (LUAD) remains underexplored. Aim This study aimed to integrate multi-omics data to identify novel prognostic biomarkers and elucidate their potential mechanism. M...

Life SciencesBiochemistry, Genetics and Molecular BiologyCancer ResearchOpen Access
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Computational evaluation of AKT2 mutations reveals R274H and R467W as potential drivers of protein instability and inhibitor resistance in cancer therapy

Verified

Sadia Afrin Runa, Mahafujul Islam Quadery Tonmoy, Md. Ashiqul Islam, Md. Aminul Islam

Journal: PLoS ONEYear: 2025

Cancer remains a leading cause of mortality worldwide, with genetic alterations such as single nucleotide polymorphisms (SNPs) playing a critical role in tumor progression and therapy resistance. Non-synonymous SNPs (nsSNPs) in AKT2, a key kinase in the PI3K/AKT signaling pathway, can impact protein...

Life SciencesBiochemistry, Genetics and Molecular BiologyMolecular BiologyOpen Access
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